covid 19 image classification

https://keras.io (2015). Finally, the predator follows the levy flight distribution to exploit its prey location. 4 and Table4 list these results for all algorithms. In Future of Information and Communication Conference, 604620 (Springer, 2020). More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. Both datasets shared some characteristics regarding the collecting sources. SharifRazavian, A., Azizpour, H., Sullivan, J. 51, 810820 (2011). In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. used a dark Covid-19 network for multiple classification experiments on Covid-19 with an accuracy of 87% [ 23 ]. Biases associated with database structure for COVID-19 detection in X A comprehensive study on classification of COVID-19 on - PubMed Currently, a new coronavirus, called COVID-19, has spread to many countries, with over two million infected people or so-called confirmed cases. 2 (left). Li, J. et al. Syst. In this experiment, the selected features by FO-MPA were classified using KNN. In order to normalize the values between 0 and 1 by dividing by the sum of all feature importance values, as in Eq. contributed to preparing results and the final figures. In my thesis project, I developed an image classification model to detect COVID-19 on chest X-ray medical data using deep learning models such . all above stages are repeated until the termination criteria is satisfied. }\delta (1-\delta ) U_{i}(t-1)+ \frac{1}{3! Image Anal. In this paper, different Conv. CNNs are more appropriate for large datasets. An efficient feature generation approach based on deep learning and feature selection techniques for traffic classification. Li et al.36 proposed an FS method using a discrete artificial bee colony (ABC) to improve the classification of Parkinsons disease. Then, applying the FO-MPA to select the relevant features from the images. Identifying Facemask-Wearing Condition Using Image Super-Resolution Authors We can call this Task 2. https://doi.org/10.1155/2018/3052852 (2018). 152, 113377 (2020). Biol. The whole dataset contains around 200 COVID-19 positive images and 1675 negative COVID19 images. They shared some parameters, such as the total number of iterations and the number of agents which were set to 20 and 15, respectively. Sahlol, A.T., Yousri, D., Ewees, A.A. et al. Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. Figure3 illustrates the structure of the proposed IMF approach. Deep cnns for microscopic image classification by exploiting transfer learning and feature concatenation. CAS First: prey motion based on FC the motion of the prey of Eq. The accuracy measure is used in the classification phase. Med. Syst. Coronavirus Disease (COVID-19): A primer for emergency physicians (2020) Summer Chavez et al. Regarding the consuming time as in Fig. Automatic diagnosis of COVID-19 with MCA-inspired TQWT-based In COVID19 triage, DB-YNet is a promising tool to assist physicians in the early identification of COVID19 infected patients for quick clinical interventions. \end{aligned}$$, $$\begin{aligned} U_i(t+1)-U_i(t)=P.R\bigotimes S_i \end{aligned}$$, $$\begin{aligned} D ^{\delta } \left[ U_{i}(t+1)\right] =P.R\bigotimes S_i \end{aligned}$$, $$D^{\delta } \left[ {U_{i} (t + 1)} \right] = U_{i} (t + 1) + \sum\limits_{{k = 1}}^{m} {\frac{{( - 1)^{k} \Gamma (\delta + 1)U_{i} (t + 1 - k)}}{{\Gamma (k + 1)\Gamma (\delta - k + 1)}}} = P \cdot R \otimes S_{i} .$$, $$\begin{aligned} \begin{aligned} U(t+1)_{i}= - \sum _{k=1}^{m} \frac{(-1)^k\Gamma (\delta +1)U_{i}(t+1-k)}{\Gamma (k+1)\Gamma (\delta -k+1)} + P.R\bigotimes S_i. The results are the best achieved compared to other CNN architectures and all published works in the same datasets. Meanwhile, the prey moves effectively based on its memory for the previous events to catch its food, as presented in Eq. Although the performance of the MPA and bGWO was slightly similar, the performance of SGA and WOA were the worst in both max and min measures. Frontiers | AI-Based Image Processing for COVID-19 Detection in Chest Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). Continuing on my commitment to share small but interesting things in Google Cloud, this time I created a model for a Whereas, the slowest and the insufficient convergences were reported by both SGA and WOA in Dataset 1 and by SGA in Dataset 2. In this paper, we used TPUs for powerful computation, which is more appropriate for CNN. 78, 2091320933 (2019). Heidari, A. & Dai, Q. Discriminative clustering and feature selection for brain mri segmentation. Scientific Reports (Sci Rep) They were manually aggregated from various web based repositories into a machine learning (ML) friendly format with accompanying data loader code. A hybrid learning approach for the stagewise classification and Article He, K., Zhang, X., Ren, S. & Sun, J. Then, using an enhanced version of Marine Predators Algorithm to select only relevant features. Coronavirus disease (Covid-19) is an infectious disease that attacks the respiratory area caused by the severe acute . Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Tensorflow: Large-scale machine learning on heterogeneous systems, 2015. One of the best methods of detecting. Technol. Donahue, J. et al. Detection of lung cancer on chest ct images using minimum redundancy maximum relevance feature selection method with convolutional neural networks. 35, 1831 (2017). https://doi.org/10.1016/j.future.2020.03.055 (2020). Sci Rep 10, 15364 (2020). Building a custom CNN model: Identification of COVID-19 - Analytics Vidhya Ozturk, T. et al. On January 20, 2023, Japanese Prime Minister Fumio Kishida announced that the country would be downgrading the COVID-19 classification. All authors discussed the results and wrote the manuscript together. By filtering titles, abstracts, and content in the Google Scholar database, this literature review was able to find 19 related papers to answer two research questions, i.e. Semi-supervised Learning for COVID-19 Image Classification via ResNet HIGHLIGHTS who: Yuan Jian and Qin Xiao from the Fukuoka University, Japan have published the Article: Research and Application of Fine-Grained Image Classification Based on Small Collar Dataset, in the Journal: (JOURNAL) what: MC-Loss drills down on the channels to effectively navigate the model, focusing on different distinguishing regions and highlighting diverse features. Deep learning plays an important role in COVID-19 images diagnosis. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. Afzali, A., Mofrad, F.B. 79, 18839 (2020). what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. & Cmert, Z. It can be concluded that FS methods have proven their advantages in different medical imaging applications19. For each of these three categories, there is a number of patients and for each of them, there is a number of CT scan images correspondingly. Chong et al.8 proposed an FS model, called Robustness-Driven FS (RDFS) to select futures from lung CT images to classify the patterns of fibrotic interstitial lung diseases. \delta U_{i}(t)+ \frac{1}{2! Comput. After applying this technique, the feature vector is minimized from 2000 to 459 and from 2000 to 462 for Dataset1 and Dataset 2, respectively. The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. Mutation: A mutation refers to a single change in a virus's genome (genetic code).Mutations happen frequently, but only sometimes change the characteristics of the virus. Jcs: An explainable covid-19 diagnosis system by joint classification and segmentation. "PVT-COV19D: COVID-19 Detection Through Medical Image Classification 2022 May;144:105350. doi: 10.1016/j.compbiomed.2022.105350. J. faizancodes/COVID-19-X-Ray-Classification - GitHub In Eq. 97, 849872 (2019). Kharrat, A. Appl. Objective: Lung image classification-assisted diagnosis has a large application market. Google Scholar. The test accuracy obtained for the model was 98%. arXiv preprint arXiv:1409.1556 (2014). Automated Segmentation of Covid-19 Regions From Lung Ct Images Using and M.A.A.A. Sahlol, A. T., Kollmannsberger, P. & Ewees, A. Propose similarity regularization for improving C. In this paper, we try to integrate deep transfer-learning-based methods, along with a convolutional block attention module (CBAM), to focus on the relevant portion of the feature maps to conduct an image-based classification of human monkeypox disease. and JavaScript. Adv. Classification of COVID19 using Chest X-ray Images in Keras - Coursera Med. The algorithm combines the assessment of image quality, digital image processing and deep learning for segmentation of the lung tissues and their classification. Furthermore, deep learning using CNN is considered one of the best choices in medical imaging applications20, especially classification. Methods: We employed a public dataset acquired from 20 COVID-19 patients, which . Robertas Damasevicius. The main purpose of Conv. Google Scholar. In Proceedings of the IEEE Conference on computer vision and pattern recognition workshops, 806813 (2014). In Inception, there are different sizes scales convolutions (conv. In addition, the good results achieved by the FO-MPA against other algorithms can be seen as an advantage of FO-MPA, where a balancing between exploration and exploitation stages and escaping from local optima were achieved. Pangolin - Wikipedia COVID-19 Chest X -Ray Image Classification with Neural Network Future Gener. Dr. Usama Ijaz Bajwa na LinkedIn: #efficientnet #braintumor #mri For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. The conference was held virtually due to the COVID-19 pandemic. 111, 300323. How- individual class performance. volume10, Articlenumber:15364 (2020) arXiv preprint arXiv:2004.05717 (2020). where \(fi_{i}\) represents the importance of feature I, while \(ni_{j}\) refers to the importance of node j. So, there might be sometimes some conflict issues regarding the features vector file types or issues related to storage capacity and file transferring. A. Havaei, M. et al. Chollet, F. Xception: Deep learning with depthwise separable convolutions. The predator tries to catch the prey while the prey exploits the locations of its food. A survey on deep learning in medical image analysis. Thank you for visiting nature.com. As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. To evaluate the performance of the proposed model, we computed the average of both best values and the worst values (Max) as well as STD and computational time for selecting features. Machine Learning Performances for Covid-19 Images Classification based 95, 5167 (2016). Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. As seen in Table3, on Dataset 1, the FO-MPA outperformed the other algorithms in the mean of fitness value as it achieved the smallest average fitness function value followed by SMA, HHO, HGSO, SCA, BGWO, MPA, and BPSO, respectively whereas, the SGA and WOA showed the worst results. The survey asked participants to broadly classify the findings of each chest CT into one of the four RSNA COVID-19 imaging categories, then select which imaging features led to their categorization. Eng. In transfer learning, a CNN which was previously trained on a large & diverse image dataset can be applied to perform a specific classification task by23. New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. Google Scholar. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. Among the FS methods, the metaheuristic techniques have been established their performance overall other FS methods when applied to classify medical images. Purpose The study aimed at developing an AI . Our proposed approach is called Inception Fractional-order Marine Predators Algorithm (IFM), where we combine Inception (I) with Fractional-order Marine Predators Algorithm (FO-MPA). Biocybern. Therefore, several pre-trained models have won many international image classification competitions such as VGGNet24, Resnet25, Nasnet26, Mobilenet27, Inception28 and Xception29. Howard, A.G. etal. The Marine Predators Algorithm (MPA)is a recently developed meta-heuristic algorithm that emulates the relation among the prey and predator in nature37. FP (false positives) are the positive COVID-19 images that were incorrectly labeled as negative COVID-19, while FN (false negatives) are the negative COVID-19 images that were mislabeled as positive COVID-19 images. Springer Science and Business Media LLC Online. & Baby, C.J. Emphysema medical image classification using fuzzy decision tree with fuzzy particle swarm optimization clustering. 101, 646667 (2019). Med. where CF is the parameter that controls the step size of movement for the predator. Therefore, in this paper, we propose a hybrid classification approach of COVID-19. COVID-19 image classification using deep features and fractional-order Vis. Eng. Inf. Lett. is applied before larger sized kernels are applied to reduce the dimension of the channels, which accordingly, reduces the computation cost. & Mahmoud, N. Feature selection based on hybrid optimization for magnetic resonance imaging brain tumor classification and segmentation. Propose a novel robust optimizer called Fractional-order Marine Predators Algorithm (FO-MPA) to select efficiently the huge feature vector produced from the CNN. Rep. 10, 111 (2020). wrote the intro, related works and prepare results. Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. 11314, 113142S (International Society for Optics and Photonics, 2020). Inception architecture is described in Fig. where r is the run numbers. Both the model uses Lungs CT Scan images to classify the covid-19. Using X-ray images we can train a machine learning classifier to detect COVID-19 using Keras and TensorFlow. Bibliographic details on CECT: Controllable Ensemble CNN and Transformer for COVID-19 image classification by capturing both local and global image features. 41, 923 (2019). et al. Initialize solutions for the prey and predator. Appl. For instance,\(1\times 1\) conv. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. COVID-19 image classification using deep features and fractional-order marine predators algorithm Authors. Average of the consuming time and the number of selected features in both datasets. Da Silva, S. F., Ribeiro, M. X., Neto, Jd. Robustness-driven feature selection in classification of fibrotic interstitial lung disease patterns in computed tomography using 3d texture features. Although convolutional neural networks (CNNs) is considered the current state-of-the-art image classification technique, it needs massive computational cost for deployment and training. Going deeper with convolutions. 11, 243258 (2007). Support Syst. Therefore in MPA, for the first third of the total iterations, i.e., \(\frac{1}{3}t_{max}\)). \end{aligned} \end{aligned}$$, $$\begin{aligned} \begin{aligned} U_{i}(t+1)&= \frac{1}{1!} In Smart Intelligent Computing and Applications, 305313 (Springer, 2019). You are using a browser version with limited support for CSS. New Images of Novel Coronavirus SARS-CoV-2 Now Available In this subsection, the performance of the proposed COVID-19 classification approach is compared to other CNN architectures. Software available from tensorflow. Duan et al.13 applied the Gaussian mixture model (GMM) to extract features from pulmonary nodules from CT images. A properly trained CNN requires a lot of data and CPU/GPU time. 6, right), our approach still provides an overall accuracy of 99.68%, putting it first with a slight advantage over MobileNet (99.67 %). implemented the FO-MPA swarm optimization and prepared the related figures and manuscript text. Layers are applied to extract different types of features such as edges, texture, colors, and high-lighted patterns from the images. The two datasets consist of X-ray COVID-19 images by international Cardiothoracic radiologist, researchers and others published on Kaggle. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. However, the proposed FO-MPA approach has an advantage in performance compared to other works. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. Adv. It is important to detect positive cases early to prevent further spread of the outbreak. It also shows that FO-MPA can select the smallest subset of features, which reflects positively on performance. If the random solution is less than 0.2, it converted to 0 while the random solution becomes 1 when the solutions are greater than 0.2. Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. Keywords - Journal. Taking into consideration the current spread of COVID-19, we believe that these techniques can be applied as a computer-aided tool for diagnosing this virus. Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. A.T.S. Chollet, F. Keras, a python deep learning library. The evaluation outcomes demonstrate that ABC enhanced precision, and also it reduced the size of the features. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. Affectation index and severity degree by COVID-19 in Chest X-ray images Improving the ranking quality of medical image retrieval using a genetic feature selection method. MathSciNet Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. A. et al. Al-qaness, M. A., Ewees, A. Implementation of convolutional neural network approach for COVID-19 It is also noted that both datasets contain a small number of positive COVID-19 images, and up to our knowledge, there is no other sufficient available published dataset for COVID-19. The proposed cascaded system is proposed to segment the lung, detect, localize, and quantify COVID-19 infections from computed tomography images, which can reliably localize infections of various shapes and sizes, especially small infection regions, which are rarely considered in recent studies. Its structure is designed based on experts' knowledge and real medical process. Eq. So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. Multimedia Tools Appl. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and a swarm-based feature selection algorithm (Marine Predators Algorithm) to select the most relevant features. By submitting a comment you agree to abide by our Terms and Community Guidelines. The announcement confirmed that from May 8, following Japan's Golden Week holiday period, COVID-19 will be officially downgraded to Class 5, putting the virus on the same classification level as seasonal influenza. }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! For more analysis of feature selection algorithms based on the number of selected features (S.F) and consuming time, Fig. A. Med. (18)(19) for the second half (predator) as represented below. They compared the BA to PSO, and the comparison outcomes showed that BA had better performance. You have a passion for computer science and you are driven to make a difference in the research community? This task is achieved by FO-MPA which randomly generates a set of solutions, each of them represents a subset of potential features. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of . I. S. of Medical Radiology. Automatic COVID-19 lung images classification system based on convolution neural network. Cite this article. As Inception examines all X-ray images over and over again in each epoch during the training, these rapid ups and downs are slowly minimized in the later part of the training. ADS Szegedy, C. et al. (1): where \(O_k\) and \(E_k\) refer to the actual and the expected feature value, respectively. The whale optimization algorithm. The 1360 revised papers presented in these proceedings were carefully reviewed and selected from . The . Softw. In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). Eur. Med. So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer).